BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020C07LP1|AL427597
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1113 502 e-142
>3x_Contig1113
Length = 4340
Score = 502 bits (253), Expect = e-142
Identities = 264/267 (98%), Gaps = 1/267 (0%)
Strand = Plus / Minus
Query: 603 aagacgaccgccaa-tatttgttcaattaacattctgtagatgctaggataggaaataaa 661
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4336 aagacgaccgccaaatatttgttcaattaacattctgtagatgctaggataggaaataaa 4277
Query: 662 ttttatatcgaatgagttgtgaaccgataattttccgcatttgaaaacattgaaatgccg 721
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4276 ttttatatcgaatgagtagtgaaccgataattttccgcatttgaaaacattgaaatgccg 4217
Query: 722 atcctgaacggctttgctatgaacttgactacatgtggggactagaacgaagagaaatgc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4216 atcctgaacggctttgctatgaacttgactacatgtggggactagaacgaagagaaatgc 4157
Query: 782 tactagaaacataacacaaagaataaaaacatgattgaatagtgcaaagcaaatcttyta 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 4156 tactagaaacataacacaaagaataaaaacatgattgaatagtgcaaagcaaatcttcta 4097
Query: 842 gttgaatctcgagaacgacacctacgt 868
|||||||||||||||||||||||||||
Sbjct: 4096 gttgaatctcgagaacgacacctacgt 4070
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,677
Number of Sequences: 1807
Number of extensions: 15677
Number of successful extensions: 1918
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)